Marina Kalinina

Research advisors: Professor Olga Dontsova, Professor Dmitri Pervouchine

Program entry year – 2017

Graduated from MSU, Faculty of Bioengineering and Bioinformatics  in 2017

Research project: Long-range complementary interactions in human pre-mRNAs and their implications in splicing

Research interests: RNA structures, splicing, molecular mechanisms of splicing regulation

Publications:

• Kalmykova, S., Kalinina, M., Denisov, S., Mironov, A., Skvortsov, D., Guigó, R., & Pervouchine, D. (2021). Conserved long-range base pairings are associated with pre-mRNA processing of human genes. Nature communications, 12(1), 1-17.
• Kalinina, M., Skvortsov, D., Kalmykova, S., Ivanov, T., Dontsova, O., & Pervouchine, D. D. (2021). Multiple competing RNA structures dynamically control alternative splicing in the human ATE1 gene. Nucleic Acids Research, 49(1), 479-490.

• Skvortsov, D. A., Emashova, S. K., Kalinina, M. A., & Dontsova, O. A. (2021). Cyanine mitochondrial dye with slightly selective cytotoxicity against A549 cancerous cells. Archiv der Pharmazie, 354(3), 2000281.
• Novotortsev, V. K., Kukushkin, M. E., Tafeenko, V. A., Skvortsov, D. A., Kalinina, M. A., Timoshenko, R. V., … & Beloglazkina, E. K. (2021). Dispirooxindoles Based on 2-Selenoxo-Imidazolidin-4-Ones: Synthesis, Cytotoxicity and ROS Generation Ability. International journal of molecular sciences, 22(5), 2613.
• Finko, A. V., Skvortsov, D. A., Laikov, D. N., Averochkin, G. M., Dlin, E. A., Kalinina, M. A., … & Majouga, A. G. (2020). Synthesis and biological activity of 5-aryliden-2-thiohydantoin S-aryl derivatives. Bioorganic Chemistry, 100, 103900.
• Kalinina, M. A., Skvortsov, D. A., Rubtsova, M. P., Komarova, E. S., & Dontsova, O. A. (2018). Cytotoxicity test based on human cells labeled with fluorescent proteins: fluorimetry, photography, and scanning for high-throughput assay. Molecular Imaging and Biology, 20(3), 368-377.

Conference presentations:

• Marina Kalinina, Olga Babadei, Dmitry Skvortsov, Svetlana Kalmykova, Olga Dontsova, and Dmitri D. Pervouchine “Long-range RNA-RNA pairings in human pre-mRNAs and their implications in alternative splicing”, RNA 2021, online. Poster presentation
• Marina Kalinina, Dmitry Skvortsov, Svetlana Kalmykova, Olga Dontsova, and Dmitri D. Pervouchine “Multiple competing RNA structures dynamically control alternative splicing in human ATE1 gene”, Splicing 2020 (3^rdInternational Caparica Conference in Splicing), online. Poster presentation
• M.A. Kalinina, S.D. Kalmykova, D.A. Skvortsov, D.D. Pervouchine, O.A. Dontsova “Long-range RNA structures in human pre-mRNAs and alternative splicing”, VI Russian Congress on Biochemistry, Sochi-Dagomys, Russia, 2019. Poster presentation