MSc Thesis Defenses

 

Student Pi Theme Presentation
Bogdan Kirillov Ekaterina Savitskaya Interpretable evaluation of Cas9-gRNA and Cpf1-gRNA specificity to on-targets and off-targets via Deep Learning
Mariia Vlasenok Konstantin Severinov Regulation of genome-wide transcription by essential factors that control promoter-proximal RNA polymerase II pausing in human cells 1-vlasenok_mariia_18june
Matvei Kolesnik Konstantin Severinov Matvei Kolesnik Konstantin Severinov Off-target degradation of cellular RNA by CRISPR-Cas13a nuclease: evidence of the involvement of RNA-targeting toxins
Alena Drobiazko Konstantin Severinov The Study of BREX System Proteins Functions 4-drobiazko-alena-18-06-2019
Karyna Karneyeva Konstantin Severinov A study of bacteriophage infection processes in the presence of Type III CRISPR-Cas mediated defense
Ivan Fedorov Ekaterina Savitskaya Detection of rare CRISPR adaptation events by suppressing PCR
Laura Chacon Machado Ekaterina Savitskaya The role of NHEJ double-strand break repair on sgRNA/Cas9 targeting in Pseudomonas putida KT2440
Polina Muziukina Ekaterina Savitskaya Evaluation of CRISPR spacers diversity in Clostridium difficile clinical isolates 8-muzyukina_18-06
Aleksandr Kirillov Konstantin Severinov The influence of copy number of restriction-modification genes on protection from viral infection
Eldar Yagmurov Svetlana Dubiley The study of putative mcc-like gene cluster from Hyalangium minutum
Stepan Ovchinnikov Svetlana Dubiley Study of type II GNAT toxin-antitoxin systems
Valeriia Mitsurova Konstantin Severinov Studying the involvement of autophagy in the response of A. thaliana to M. persicae attack
Anastasiia Stepanova Konstantin Severinov Leafy head development of Chinese cabbage 6-stepanova_anastasiia_19_june
Aleksandr Polkhovskii Konstantin Severinov Characterization of telomerase machinery components in Brassicaceae family
Sergei Bogomolov Konstantin Severinov  Antimicrobial phytochemicals from edible and medicinal plants 8-bogomolov-sergei-19_06_2019
Alevtina Koreshova Georgii Bazykin Phylogeographic analysis of hepatitis A virus in Russia
Anna Obraztsova Mikhail Shugai Bioinformatic analysis of memory B cell receptor repertoires with an improved algorithm for lineage tree reconstruction
Anna Zhdanova Georgii Bazykin Digging the genomes of spontaneously aborted embryos for Mendelian pathogenic traits
Bogdan Kirillov Ekaterina Savitskaya Interpretable evaluation of Cas9-gRNA and Cpf1-gRNA specificity to on-targets and off-targets via Deep Learning.
Denis Moiseenko Dmitriy Chudakov Finding signatures of viral infection in T cell repertoire sequencing data
Egor Semenchenko Georgii Bazykin Evolution of germline mutational spectra among great apes
Grigorii Sukhorukov Georgii Bazykin Recombination in tick-borne encephalitis virus
Arsenii Pozdyshev Mikhail Gelfand A microbiome-based approach for oil-well inflow determination
Nurislam Shaikhutdinov Georgii Bazykin Population genomics of the sleeping chironomid (Polypedilum vanderplanki)
Olga Gavrilenko Philipp Khaitovich Human-specific lipidome features in anterior cingulate cortex and cerebellum based on mass-spectrometry analysis
Matvei Bulat Philipp Khaitovich Evolutionary novel cell phenotypes in human anterior cingulate cortex revealed by single cell transcriptomics
Yuliya Sarana Mikhail Gelfand Comparative analysis of aphid microbiomes
Sergei Slavskii Georgii Bazykin Analysis of human height as a complex trait using the UK Biobank megacohort
Svetlana Kalmykova Dmitri Pervouchine Impact of somatic mutations disrupting RNA structure on alternative splicing
Julia Shaykhutdinova Mikhail Gelfand A biology-based mathematical model of immunotherapy for murine syngeneic tumor models
Olga Isaeva Dmitriy Chudakov Influence of immunotherapy and prognostic significance of lymphocytes in tumor microenvironment
Vladislav Belousov Mikhail Shugai Studying interactions between alpha and beta chains of the T-cell receptor and alpha-beta pairing preferences
Filipp Sergeev Timofei Zatsepin Downregulation of adenosine N6-methylation in RNA contributes to rRNA processing
Mariia Nazarova Timofei Zatsepin Development of CYTOR and MIR4435-2HG lncRNAs knockout cell lines and study of a unique 2HG-216 transcript in vitro.
Sofia Kamalian Mikhail Gelfand Characterization of the functional role of the CTCF terminal domains
Grigorii Perelman Yuri Kotelevtsev Discovery of signaling pathways involved in downregulation of hyaluronan and collagen
Kirill Danilov Yuri Kotelevtsev In vitro efficacy assessment of AAV based vectors for the gene therapy of Duchenne muscular dystrophy
Kulash Zhumadilova Evgeny Nikolaev Identification of lipid markers of human brain gliomas by using accurate mass measurements and MS/MS technique in mass spectrometry imaging
Tinashe Prince Maviza Petr Sergiev Biochemical and Structural Characterization of Tetracinomycin X – a Novel Translational Inhibitor
Mahmoud Badawi Youssef Gouda Philipp Khaitovich Region-specific features of the сortical architecture unique to the human brain
Marina Makharova Dmitriy Chudakov The role of LDB1 in the regulation of antibody maturation in B cells
Svetlana Khorkova Dmitriy Chudakov Study of trans-chromosomal inserts in immunoglobulin genes
Anna Egorova Olga Dontsova Functions of L116 small mitochondrial polypeptide in mouse fibroblasts
Oleg Baranov Olga Dontsova Processing and localization of telomerase RNA
Matvei Bulat Philipp Khaitovich Evolutionary novel cell phenotypes in human anterior cingulate cortex revealed by single cell transcriptomics