Aleksey Mironov

Research advisor: Professor Dmitri Pervouchine

Program entry year: 2018

Graduated from HSE, Faculty of Computer Science 2018

Research project: Tandem alternative splice sites in wellness and disease

Research interests: functionality of alternative splicing isoforms, evolution of splicing, molecular mechanisms of RNA processing

Academic mobility:
University: Technical University of Munich

https://www.tum.de

Dates: 01.10.2013 – 01.03.2014

Publications:

• Kalmykova, S., Kalinina, M., Denisov, S., Mironov, A., Skvortsov, D., Guigó, R., & Pervouchine, D. (2021). Conserved long-range base pairings are associated with pre-mRNA processing of human genes. Nature communications, 12(1), 1-17.
• Mironov, A., Denisov, S., Gress, A., Kalinina, O. V., & Pervouchine, D. D. (2021). An extended catalogue of tandem alternative splice sites in human tissue transcriptomes. PLoS computational biology, 17(4), e1008329.
• Sorokin, M., Kholodenko, I., Kalinovsky, D., Shamanskaya, T., Doronin, I., Konovalov, D., … & Buzdin, A. (2020). RNA Sequencing-Based Identification of Ganglioside GD2-Positive Cancer Phenotype. Biomedicines, 8(6), 142.
• Миронов А.Г., Рубинов А.Р. Учет прибыли контролируемых иностранных компаний: от теории к практике. Налоговая политика и практика, 2017-3 (34-40), 2017-4 (68-75)

Conference presentations:

• An extended catalogue of tandem alternative splice sites in human tissue transcriptomes. Aleksei Mironov, Stepan Denisov, Alexander
  Gress, Olga V. Kalinina, Dmitri D. Pervouchine. Moscow Conference on Computational Molecular Biology (MCCMB) 2021. Oral talk.
• Functional annotation of splicing aberrations in coding and non coding RNA. Aleksei Mironov, Stepan Denisov, Olga Kalinina, Dmitri Pervouchine. The Non Coding Genome, EMBL, Heidelberg, 2019. Poster.
• Structural annotation of protein indels associated with splicing aberrations. Aleksei Mironov, Stepan Denisov, Olga Kalinina, Dmitri Pervouchine. Moscow Conference on Computational Molecular Biology (MCCMB) 2019. Oral talk.
• Identification of micropeptides by characteristic splicing patterns in RNA-seq data. Alexey Mironov, Olga Kalinina, Rory Johnson, Dmitri Pervouchine. 2018 ISCB Barcelona NGS Structural Variation and Populations Genomics (NGS 2018), 9-11 April 2018, Barcelona, Spain. Poster presentation